use std::{marker::PhantomData, num::NonZeroU32};
use serde::{Deserialize, Serialize};
use necsim_core::cogs::{LineageStore, MathsCore, RngCore};
use necsim_core_bond::{OffByOneU32, OpenClosedUnitF64 as PositiveUnitF64};
use necsim_partitioning_core::partition::Partition;
use necsim_impls_no_std::{
cogs::{
dispersal_sampler::non_spatial::NonSpatialDispersalSampler,
habitat::non_spatial::NonSpatialHabitat,
origin_sampler::{non_spatial::NonSpatialOriginSampler, pre_sampler::OriginPreSampler},
speciation_probability::uniform::UniformSpeciationProbability,
turnover_rate::uniform::UniformTurnoverRate,
},
decomposition::modulo::ModuloDecomposition,
};
use crate::{Scenario, ScenarioCogs, ScenarioParameters};
#[allow(clippy::module_name_repetitions, clippy::empty_enum)]
pub enum NonSpatialScenario {}
#[derive(Clone, Debug, Serialize, Deserialize)]
#[allow(clippy::module_name_repetitions)]
#[serde(deny_unknown_fields)]
#[serde(rename = "NonSpatial")]
pub struct NonSpatialArguments {
pub area: (OffByOneU32, OffByOneU32),
pub deme: NonZeroU32,
}
impl ScenarioParameters for NonSpatialScenario {
type Arguments = NonSpatialArguments;
type Error = !;
}
impl<M: MathsCore, G: RngCore<M>> Scenario<M, G> for NonSpatialScenario {
type Decomposition = ModuloDecomposition;
type DecompositionAuxiliary = ();
type DispersalSampler = NonSpatialDispersalSampler<M, G>;
type Habitat = NonSpatialHabitat<M>;
type LineageStore<L: LineageStore<M, Self::Habitat>> = L;
type OriginSampler<'h, I: Iterator<Item = u64>> = NonSpatialOriginSampler<'h, M, I> where G: 'h;
type OriginSamplerAuxiliary = ();
type SpeciationProbability = UniformSpeciationProbability;
type TurnoverRate = UniformTurnoverRate;
fn new(
args: Self::Arguments,
speciation_probability_per_generation: PositiveUnitF64,
) -> Result<ScenarioCogs<M, G, Self>, Self::Error> {
let habitat = NonSpatialHabitat::new(args.area, args.deme);
let dispersal_sampler = NonSpatialDispersalSampler::default();
let turnover_rate = UniformTurnoverRate::default();
let speciation_probability =
UniformSpeciationProbability::new(speciation_probability_per_generation.into());
Ok(ScenarioCogs {
habitat,
dispersal_sampler,
turnover_rate,
speciation_probability,
origin_sampler_auxiliary: (),
decomposition_auxiliary: (),
_marker: PhantomData::<(M, G, Self)>,
})
}
fn sample_habitat<'h, I: Iterator<Item = u64>>(
habitat: &'h Self::Habitat,
pre_sampler: OriginPreSampler<M, I>,
_auxiliary: Self::OriginSamplerAuxiliary,
) -> Self::OriginSampler<'h, I>
where
G: 'h,
{
NonSpatialOriginSampler::new(pre_sampler, habitat)
}
fn decompose(
_habitat: &Self::Habitat,
subdomain: Partition,
_auxiliary: Self::DecompositionAuxiliary,
) -> Self::Decomposition {
ModuloDecomposition::new(subdomain)
}
}